BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D03SP1|AL428534
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1447 1661 0.0
>3x_Contig1447
Length = 7802
Score = 1661 bits (822), Expect = 0.0
Identities = 853/880 (96%)
Strand = Plus / Minus
Query: 1 aaaaccaaaacaacaaaaaatggctggatatactaagcgaagtaatgcagcgcgttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7139 aaaaccaaaacaacaaaaaatggctggatatactaagcgaagtaatgcagcgcgttagaa 7080
Query: 61 aaaaaaaatcgcgtctaactgctgtgcgctactcgaatcacacaatagctcggacatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7079 aaaaaaaatcgcgtctaactgctgtgcgctactcgaatcacacaatagctcggacatccc 7020
Query: 121 gaaacattaatggtgcagcttactcagtttactaagtttgcaaggatagagaggggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7019 gaaacattaatggtgcagcttactcagtttactaagtttgcaaggatagagaggggaagg 6960
Query: 181 aatcgtatcgggtcgtaagaattactgcatgtggcaatgtatgactgaagagcataccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6959 aatcgtatcgggtcgtaagaattactgcatgtggcaatgtatgactgaagagcataccat 6900
Query: 241 agtgaaggamagagtcatgcgtgttaaagtccggatcaatggattttytgcattttcgtt 300
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6899 agtgaaggaaagagtcatgcgtgttaaagtccggatcaatggattttttgcattttcgtt 6840
Query: 301 cacagatttcctagtgcgtgtmattygtyttycttggtttgaccttccctgcmacgaggg 360
||||||||||||||||||||| ||| || || |||||||||||||||||||| |||||||
Sbjct: 6839 cacagatttcctagtgcgtgtaatttgtttttcttggtttgaccttccctgcaacgaggg 6780
Query: 361 ggcccctaamacaaacaagaaaaamtcgcatttcasataatcgcagaacggcggctccga 420
||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 6779 ggcccctaaaacaaacaagaaaaaatcgcatttaagataatcgcagaacggcggctccga 6720
Query: 421 matgggatcttttcgtctcamtttctttyyyycctttccaaagcacaaaaccgcattatg 480
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 6719 aatgggatcttttcgtctcaatttctttttttcctttccaaagcacaaaaccgcattatg 6660
Query: 481 tttatctgatggtgttctttgttcattttggagacctctacacaagamaatgatataata 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6659 tttatctgatggtgttctttgttcattttggagacctctacacaagaaaatgatataata 6600
Query: 541 cgctagtggttacttagtcattcgtttgtctttggatggtgtgtctcatgacacgatttc 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6599 cgctagtggttacttagtcattcgtttgtttttggatggtgtgtctcatgacacgatttc 6540
Query: 601 sttccataacagccgcttcamatcctttgtmtttmgccgcgacttccattggtcaaattg 660
||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 6539 gttccataacagccgcttcaaatcctttgtatttagccgcgacttccattggtcaaattg 6480
Query: 661 amagamtgacgaaggaatcggagttccttcgggctcgtcgtccgggtcatggtacgasac 720
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6479 aaagaatgacgaaggaatcggagttccttcgggctcgtcgtccgggtcatggtacgagac 6420
Query: 721 caagtatggatgtsatagcgcttccgtggcagtgatccgtagcctcggatcgaattgcag 780
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 caagtatggatgtgatagcgcttccgtggcagtgatccgtagcctcggatcgaattgcag 6360
Query: 781 catccggtcaaggagatcaagagcggctgcagatgcattcgggaacctacgccgccaatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6359 catccggtcaaggagatcaagagcggctgcagatgcattcgggaacctacgccgccaatt 6300
Query: 841 gatcttgggatgcttaggtaacgagcgaatgtactcacgt 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 6299 gatcttgggatgcttaggtaacgagcgaatgtactcacgt 6260
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4793
Number of Sequences: 1807
Number of extensions: 4793
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.5 bits)